unable to delete payrun as can't delete reversing journal

Due to the realisation super wasn't input correctly, I had to re-do all the pays from July.  Two pays are not showing up on the bank rec, but they come up on the reports.  I can't delete the pays either as they come up with error "you can't delete a reversing journal", so I am stuck and naturally they are from July. Can I just put in another journal entry for these two pays to reflect what has already occurred according to the bank statement? Will doing this stuff up the end of year reports?  I've unreconciled everything from July and now am starting to feel the pinch of all the catch up work I'll have to do.  I am using Reckon One.  Thanks for you help.